EnhancerDB
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  3. rs62199052[chr2:232474316]
Enhancers that have rs62199052[chr2:232474316]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232460065 232495135 enh6201
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs62199052[chr2:232474316]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232474303 232474322 PITX2 TRANSFAC yes 81725377
chr2 232474309 232474322 ZBTB18 JASPAR yes 81725378
chr2 232474310 232474322 PKNOX1 JASPAR yes 81725379
chr2 232474310 232474322 TGIF1 JASPAR yes 81725380
chr2 232474311 232474320 SNAI2 JASPAR yes 81725381
chr2 232474311 232474321 FIGLA JASPAR yes 81725382
chr2 232474311 232474321 ID4 JASPAR yes 81725383
chr2 232474311 232474321 TCF3 JASPAR yes 81725384
chr2 232474311 232474321 TCF4 JASPAR yes 81725385
chr2 232474313 232474322 ZEB1 JASPAR yes 81725386
chr2 232474313 232474323 TBX21 JASPAR yes 81725387
chr2 232474314 232474322 MGA JASPAR yes 81725388
chr2 232474314 232474322 TBX15 JASPAR yes 81725389
chr2 232474314 232474322 TBX1 JASPAR yes 81725390
chr2 232474314 232474322 TBX4 JASPAR yes 81725391
chr2 232474314 232474322 TBX5 JASPAR yes 81725392
chr2 232474314 232474324 TBR1 JASPAR yes 81725393
chr2 232474314 232474327 SMAD2 JASPAR yes 81725394
Genes associated with rs62199052[chr2:232474316], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More