EnhancerDB
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  3. rs62277709[chr3:149104519]
Enhancers that have rs62277709[chr3:149104519]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 149097815 149115835 enh21019
Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Heart
Transcript factors that have rs62277709[chr3:149104519]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 149102613 149105367 POLR2A UCSC Txn Factor no Conserved 108530644
chr3 149104298 149105035 REST UCSC Txn Factor no Conserved 108530645
chr3 149104365 149105226 EP300 UCSC Txn Factor no Conserved 108530646
chr3 149104459 149105148 TCF12 UCSC Txn Factor no Conserved 108530647
chr3 149104464 149105327 TCF7L2 UCSC Txn Factor no Conserved 108530648
chr3 149104518 149104530 GRHL1 JASPAR yes 6489070
chr3 149104519 149104529 TFCP2 JASPAR yes 6489071
Genes associated with rs62277709[chr3:149104519], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More