EnhancerDB
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  3. rs624030[chr11:72459528]
Enhancers that have rs624030[chr11:72459528]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 72444521 72462512 enh1866
Bone Marrow (K562) Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs624030[chr11:72459528]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 72459521 72459533 GLI2 JASPAR yes 39701736
chr11 72459526 72459536 NKX2-3 JASPAR yes 39701737
chr11 72459527 72459536 NKX2-8 JASPAR yes 39701738
Genes associated with rs624030[chr11:72459528], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr11 72525353 72554719 + ATG16L2 ENSG00000168010.6 72525353 65825 Esophagus 0.274162 11221