EnhancerDB
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  3. rs6421766[chr1:205258843]
Enhancers that have rs6421766[chr1:205258843]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205243649 205259635 enh893
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Heart
Transcript factors that have rs6421766[chr1:205258843]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205257531 205259590 ZNF274 GTRD no Bone Marrow (K562) 21371598
chr1 205257531 205259590 ZNF274 GTRD no Bone Marrow (K562) 107861584
chr1 205257980 205259466 ZNF274 GTRD no Bone Marrow (K562) 21371602
chr1 205258166 205259316 ZNF274 GTRD no Bone Marrow (K562) 21371605
chr1 205258221 205259188 ZNF274 GTRD no Bone Marrow (K562) 21371608
chr1 205258239 205259081 ZBTB33 GTRD no Brain (SK-N-SH) 21371610
chr1 205258290 205260432 ZNF274 GTRD no Cervix (HeLa-S3) 21371611
chr1 205258290 205260432 ZNF274 GTRD no Cervix (HeLa-S3) 21371612
chr1 205258301 205259452 ZNF274 GTRD no Cervix (HeLa-S3) 21371614
chr1 205258351 205259181 ZBTB33 GTRD no Brain (SK-N-SH) 21371615
chr1 205258377 205259366 ZNF274 GTRD no Bone Marrow (K562) 21371616
chr1 205258386 205259292 ZNF274 GTRD no Bone Marrow (K562) 21371617
chr1 205258481 205259200 ZNF274 GTRD no Bone Marrow (K562) 21371618
chr1 205258553 205259072 ZNF274 GTRD no Cervix (HeLa-S3) 21371619
chr1 205258565 205259890 ZNF274 GTRD no Bone Marrow (K562) 21371620
chr1 205258601 205259467 ZNF143 GTRD no Epithelial (MCF-7) 21371621
chr1 205258695 205259284 ZNF274 GTRD no Bone Marrow (K562) 21371622
chr1 205258707 205259183 ZNF274 GTRD no Bone Marrow (K562) 21371623
chr1 205258730 205259201 ZNF143 GTRD no Epithelial (MCF-7) 21371624
chr1 205258740 205259234 ZNF274 GTRD no Bone Marrow (K562) 21371625
chr1 205258757 205259151 ZNF274 GTRD no Bone Marrow (K562) 21371626
chr1 205258769 205259182 ZNF274 GTRD no Bone Marrow (K562) 21371627
chr1 205258771 205259182 ZNF274 GTRD no Bone Marrow (K562) 21371628
chr1 205258802 205259259 ZBTB33 GTRD no Brain (SK-N-SH) 21371629
chr1 205258827 205258848 IRF1 JASPAR yes 34752028
chr1 205258828 205258843 FOXP1 JASPAR yes 34752029
chr1 205258830 205258845 FOXP1 JASPAR yes 34752030
chr1 205258831 205258846 STAT2 JASPAR yes 34752031
chr1 205258832 205258847 FOXP1 JASPAR yes 34752032
chr1 205258832 205258853 IRF1 JASPAR yes 34752033
chr1 205258832 205259193 ZNF274 GTRD no Blood (GM12878) 21371630
chr1 205258833 205258854 IRF1 JASPAR yes 34752034
chr1 205258834 205258846 FOXC2 JASPAR yes 34752035
chr1 205258834 205258854 RREB1 JASPAR yes 34752036
chr1 205258835 205258846 FOXP2 JASPAR yes 34752037
chr1 205258837 205258852 FOXP1 JASPAR yes 34752038
chr1 205258838 205258859 IRF1 JASPAR yes 34752039
chr1 205258839 205258854 FOXP1 JASPAR yes 34752040
chr1 205258839 205258860 IRF1 JASPAR yes 34752041
chr1 205258842 205259180 ZNF143 GTRD no Epithelial (MCF-7) 21371631
chr1 205258843 205259457 ZNF143 GTRD no Epithelial (MCF-7) 21371632
Genes associated with rs6421766[chr1:205258843], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More