EnhancerDB
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  3. rs6424239[chr1:232758337]
Enhancers that have rs6424239[chr1:232758337]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232744026 232773755 enh12786
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Muscle (A673) Heart
Transcript factors that have rs6424239[chr1:232758337]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232758141 232758605 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21392295
chr1 232758188 232758564 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21392296
chr1 232758329 232758339 TBX21 JASPAR yes 36178479
chr1 232758329 232758340 TBX20 JASPAR yes 36178480
chr1 232758329 232758340 TBX2 JASPAR yes 36178481
chr1 232758329 232758342 EOMES JASPAR yes 36178482
chr1 232758329 232758343 JUN JASPAR yes 36178483
chr1 232758330 232758338 MGA JASPAR yes 36178484
chr1 232758330 232758338 TBX15 JASPAR yes 36178485
chr1 232758330 232758338 TBX1 JASPAR yes 36178486
chr1 232758330 232758338 TBX4 JASPAR yes 36178487
chr1 232758330 232758338 TBX5 JASPAR yes 36178488
chr1 232758330 232758340 TBR1 JASPAR yes 36178489
chr1 232758333 232758344 FOS JASPAR yes 36178490
chr1 232758333 232758344 FOSL1 JASPAR yes 36178491
chr1 232758333 232758344 JUND JASPAR yes 36178492
chr1 232758334 232758348 JUN JASPAR yes 36178493
chr1 232758335 232758341 JUN TRANSFAC yes 36178494
Genes associated with rs6424239[chr1:232758337], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More