EnhancerDB
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  3. rs6425641[chr1:180486281]
Enhancers that have rs6425641[chr1:180486281]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180482964 180504974 enh12423
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs6425641[chr1:180486281]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180485891 180486676 ZNF274 GTRD no Bone Marrow (K562) 21353306
chr1 180486077 180486405 ZNF274 GTRD no Cervix (HeLa-S3) 21353307
chr1 180486077 180486535 ZNF274 GTRD no Liver (HepG2) 21353308
chr1 180486088 180486467 ZNF274 GTRD no Cervix (HeLa-S3) 21353309
chr1 180486090 180486467 ZNF274 GTRD no Cervix (HeLa-S3) 21353310
chr1 180486182 180486500 ZNF274 GTRD no Bone Marrow (K562) 21353311
chr1 180486280 180486286 YY1 JASPAR yes 33519913
chr1 180486281 180486301 RREB1 JASPAR yes 33519914
Genes associated with rs6425641[chr1:180486281], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More