EnhancerDB
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  3. rs6425642[chr1:180486709]
Enhancers that have rs6425642[chr1:180486709]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180482964 180504974 enh12423
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs6425642[chr1:180486709]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180486693 180486711 SRF JASPAR yes 33520031
chr1 180486703 180486709 MZF1 JASPAR yes 33520033
chr1 180486705 180486715 SP1 JASPAR yes 33520034
Genes associated with rs6425642[chr1:180486709], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More