EnhancerDB
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  3. rs6425643[chr1:180486909]
Enhancers that have rs6425643[chr1:180486909]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180482964 180504974 enh12423
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs6425643[chr1:180486909]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180486907 180486925 RARA JASPAR yes 33520057
Genes associated with rs6425643[chr1:180486909], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More