EnhancerDB
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  3. rs6426547[chr1:227004367]
Enhancers that have rs6426547[chr1:227004367]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226990625 227018206 enh975
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6426547[chr1:227004367]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 227004168 227004764 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21387678
chr1 227004254 227004630 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21387679
chr1 227004358 227004371 POU3F3 JASPAR yes 35847605
chr1 227004358 227004372 POU1F1 JASPAR yes 35847606
chr1 227004361 227004373 FOXI1 JASPAR yes 35847608
Genes associated with rs6426547[chr1:227004367], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 227057885 227083806 + PSEN2 ENSG00000143801.12 227057885 53518 Adrenal 0.000257982 1903