EnhancerDB
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  3. rs6427196[chr1:169481223]
Enhancers that have rs6427196[chr1:169481223]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 169475665 169483175 enh12361
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Esophagus Astrocyte Stomach Placenta Lung (PC-9) Muscle (Myoblast) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs6427196[chr1:169481223]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 169480889 169481229 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349488
chr1 169481209 169481224 MEF2C JASPAR yes 33006702
chr1 169481210 169481225 MEF2A JASPAR yes 33006704
Genes associated with rs6427196[chr1:169481223], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 169433147 169455241 - SLC19A2 ENSG00000117479.8 169455241 25982 Lung 0.0563605 1548