EnhancerDB
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Enhancers that have rs6428668[chr1:117268661]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117246825 117269613 enh43034
Skin (Keratinocyte) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Blood (OCI-LY7) Stomach Muscle (A673) Lung (PC-9) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs6428668[chr1:117268661]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117266324 117270021 ZNF143 GTRD no Epithelial (MCF-7) 21333623
chr1 117266729 117270155 ZNF143 GTRD no Epithelial (MCF-7) 21333624
chr1 117266936 117270864 ZNF143 GTRD no Epithelial (MCF-7) 21333625
chr1 117267308 117270533 ZNF143 GTRD no Epithelial (MCF-7) 21333627
chr1 117267412 117270692 ZNF143 GTRD no Epithelial (MCF-7) 21333628
chr1 117267517 117270289 ZNF143 GTRD no Epithelial (MCF-7) 21333629
chr1 117267524 117269641 ZNF143 GTRD no Epithelial (MCF-7) 21333630
chr1 117267647 117270660 ZNF143 GTRD no Epithelial (MCF-7) 21333631
chr1 117267743 117269638 ZNF143 GTRD no Epithelial (MCF-7) 21333632
chr1 117267769 117269546 ZNF143 GTRD no Epithelial (MCF-7) 21333633
chr1 117267999 117269493 ZNF143 GTRD no Epithelial (MCF-7) 21333634
chr1 117267999 117269667 ZNF143 GTRD no Epithelial (MCF-7) 21333635
chr1 117268096 117270307 ZNF143 GTRD no Epithelial (MCF-7) 21333636
chr1 117268141 117270392 ZNF143 GTRD no Epithelial (MCF-7) 21333637
chr1 117268226 117269612 ZNF143 GTRD no Epithelial (MCF-7) 21333638
chr1 117268263 117270220 ZNF143 GTRD no Epithelial (MCF-7) 21333639
chr1 117268316 117269529 ZNF143 GTRD no Epithelial (MCF-7) 21333640
chr1 117268321 117269976 ZNF143 GTRD no Epithelial (MCF-7) 21333641
chr1 117268362 117269510 ZNF143 GTRD no Epithelial (MCF-7) 21333642
chr1 117268364 117270332 ZNF143 GTRD no Epithelial (MCF-7) 21333643
chr1 117268372 117269562 ZNF143 GTRD no Epithelial (MCF-7) 21333644
chr1 117268375 117269630 ZNF143 GTRD no Epithelial (MCF-7) 21333645
chr1 117268390 117270190 ZNF143 GTRD no Epithelial (MCF-7) 21333646
chr1 117268393 117269691 ZNF143 GTRD no Epithelial (MCF-7) 21333647
chr1 117268419 117269575 ZNF143 GTRD no Epithelial (MCF-7) 21333648
chr1 117268435 117269569 ZNF143 GTRD no Epithelial (MCF-7) 21333649
chr1 117268442 117269849 ZNF143 GTRD no Epithelial (MCF-7) 21333650
chr1 117268458 117269637 ZNF143 GTRD no Epithelial (MCF-7) 21333651
chr1 117268459 117270143 ZNF143 GTRD no Epithelial (MCF-7) 21333652
chr1 117268474 117269633 ZNF143 GTRD no Epithelial (MCF-7) 21333653
chr1 117268476 117269640 ZNF143 GTRD no Epithelial (MCF-7) 21333654
chr1 117268490 117269453 ZNF143 GTRD no Epithelial (MCF-7) 21333655
chr1 117268510 117269580 ZNF143 GTRD no Epithelial (MCF-7) 21333656
chr1 117268540 117269484 ZNF143 GTRD no Epithelial (MCF-7) 21333657
chr1 117268547 117269590 ZNF143 GTRD no Epithelial (MCF-7) 21333658
chr1 117268551 117269629 ZNF143 GTRD no Epithelial (MCF-7) 21333659
chr1 117268555 117269545 ZNF143 GTRD no Epithelial (MCF-7) 21333660
chr1 117268576 117269545 ZNF143 GTRD no Epithelial (MCF-7) 21333661
chr1 117268594 117269633 ZNF143 GTRD no Epithelial (MCF-7) 21333662
chr1 117268607 117269574 ZNF143 GTRD no Epithelial (MCF-7) 21333663
chr1 117268629 117269389 ZNF143 GTRD no Epithelial (MCF-7) 21333664
chr1 117268635 117269429 ZNF143 GTRD no Epithelial (MCF-7) 21333665
chr1 117268646 117269507 ZNF143 GTRD no Epithelial (MCF-7) 21333666
chr1 117268652 117268667 FOXP1 JASPAR yes 31832829
chr1 117268657 117269547 ZNF143 GTRD no Epithelial (MCF-7) 21333667
chr1 117268657 117269587 ZNF143 GTRD no Epithelial (MCF-7) 21333668
chr1 117268661 117268665 YY1 TRANSFAC yes 31832830
Genes associated with rs6428668[chr1:117268661], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More