EnhancerDB
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  3. rs644906[chr1:201677509]
Enhancers that have rs644906[chr1:201677509]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201670008 201708415 enh12526
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs644906[chr1:201677509]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201677500 201677519 RFX2 JASPAR yes 34522669
chr1 201677507 201677519 TFAP2A JASPAR yes 34522670
chr1 201677507 201677519 TFAP2B JASPAR yes 34522671
chr1 201677507 201677519 TFAP2C JASPAR yes 34522672
chr1 201677507 201677522 TFAP2A JASPAR yes 34522673
chr1 201677507 201677522 TFAP2C JASPAR yes 34522674
chr1 201677508 201677517 TFAP2A JASPAR yes 34522675
chr1 201677508 201677519 EBF1 JASPAR yes 34522676
chr1 201677509 201677518 TFAP2A JASPAR yes 34522677
Genes associated with rs644906[chr1:201677509], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More