EnhancerDB
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  3. rs6452942[chr5:90472680]
Enhancers that have rs6452942[chr5:90472680]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90450185 90481862 enh22423
Prostate (PC-3) Brain (SK-N-MC) Esophagus Liver Lung (A549) Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs6452942[chr5:90472680]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90472671 90472680 HIC2 JASPAR yes 64173397
chr5 90472678 90472690 TAL1 JASPAR yes 64173398
chr5 90472680 90472686 YY1 JASPAR yes 64173399
chr5 90472680 90472690 NEUROG2 JASPAR yes 64173400
chr5 90472680 90472692 TAL1 JASPAR yes 64173401
Genes associated with rs6452942[chr5:90472680], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More