EnhancerDB
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  3. rs6501197[chr17:76334015]
Enhancers that have rs6501197[chr17:76334015]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76316725 76355075 enh17407
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6501197[chr17:76334015]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76333478 76334108 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21793515
chr17 76333495 76334179 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21793516
chr17 76333595 76334115 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21793518
chr17 76333606 76334126 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21793520
chr17 76333610 76334200 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21793521
chr17 76333659 76334039 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21793527
chr17 76333692 76334072 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21793533
chr17 76333717 76334017 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21793536
chr17 76334000 76334018 RARA JASPAR yes 56149174
Genes associated with rs6501197[chr17:76334015], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More