EnhancerDB
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  3. rs6503650[chr17:39804000]
Enhancers that have rs6503650[chr17:39804000]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39800139 39815735 enh17152
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Lung (A549) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Breast Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs6503650[chr17:39804000]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39803989 39804004 TFAP2A JASPAR yes 54268078
chr17 39803989 39804004 TFAP2C JASPAR yes 54268079
chr17 39803995 39804001 PEA3 TRANSFAC yes 54268080
chr17 39804000 39804015 TFAP2A JASPAR yes 54268081
chr17 39804000 39804015 TFAP2C JASPAR yes 54268082
Genes associated with rs6503650[chr17:39804000], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More