EnhancerDB
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  3. rs6504039[chr17:59399290]
Enhancers that have rs6504039[chr17:59399290]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59383635 59420035 enh17269
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs6504039[chr17:59399290]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59396443 59400405 ZNF143 GTRD no Epithelial (MCF-7) 21777324
chr17 59396443 59400405 ZNF143 GTRD no Epithelial (MCF-7) 108279396
chr17 59399278 59399298 RREB1 JASPAR yes 55148117
chr17 59399279 59399299 RREB1 JASPAR yes 55148118
chr17 59399282 59399294 FOXI1 JASPAR yes 55148120
chr17 59399282 59399297 FOXP1 JASPAR yes 55148121
chr17 59399282 59399302 RREB1 JASPAR yes 55148122
chr17 59399283 59399303 RREB1 JASPAR yes 55148123
chr17 59399286 59399298 FOXI1 JASPAR yes 55148124
chr17 59399286 59399306 RREB1 JASPAR yes 55148125
chr17 59399287 59399307 RREB1 JASPAR yes 55148126
chr17 59399290 59399302 FOXI1 JASPAR yes 55148127
Genes associated with rs6504039[chr17:59399290], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More