EnhancerDB
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Enhancers that have rs6510680[chr19:2530139]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6510680[chr19:2530139]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2526984 2530255 ZNF143 GTRD no Epithelial (MCF-7) 21836208
chr19 2526984 2530255 ZNF143 GTRD no Epithelial (MCF-7) 108361202
chr19 2526984 2530255 ZNF143 GTRD no Epithelial (MCF-7) 108361203
chr19 2527095 2530280 ZNF143 GTRD no Epithelial (MCF-7) 21836209
chr19 2527095 2530280 ZNF143 GTRD no Epithelial (MCF-7) 108361204
chr19 2527095 2530280 ZNF143 GTRD no Epithelial (MCF-7) 108361205
chr19 2528350 2530251 ZNF143 GTRD no Epithelial (MCF-7) 21836215
chr19 2528350 2530251 ZNF143 GTRD no Epithelial (MCF-7) 108361213
chr19 2528350 2530251 ZNF143 GTRD no Epithelial (MCF-7) 108361214
chr19 2528354 2530258 ZNF143 GTRD no Epithelial (MCF-7) 21836216
chr19 2528354 2530258 ZNF143 GTRD no Epithelial (MCF-7) 108361215
chr19 2528354 2530258 ZNF143 GTRD no Epithelial (MCF-7) 108361216
chr19 2528357 2530299 ZNF274 GTRD no Cervix (HeLa-S3) 21836217
chr19 2528357 2530299 ZNF274 GTRD no Cervix (HeLa-S3) 108361217
chr19 2528357 2530299 ZNF274 GTRD no Cervix (HeLa-S3) 108361218
chr19 2528384 2530300 ZNF274 GTRD no Cervix (HeLa-S3) 21836219
chr19 2528384 2530300 ZNF274 GTRD no Cervix (HeLa-S3) 108361220
chr19 2528384 2530300 ZNF274 GTRD no Cervix (HeLa-S3) 108361221
chr19 2528432 2530179 ZNF274 GTRD no Cervix (HeLa-S3) 21836223
chr19 2528432 2530179 ZNF274 GTRD no Cervix (HeLa-S3) 108361227
chr19 2528432 2530179 ZNF274 GTRD no Cervix (HeLa-S3) 108361228
chr19 2528457 2530168 AR GTRD no Prostate (PC-3) 21836225
chr19 2528457 2530168 AR GTRD no Prostate (PC-3) 108361230
chr19 2528457 2530168 AR GTRD no Prostate (PC-3) 108361231
chr19 2528476 2530197 ZBTB33 GTRD no Lung (A549) 21836226
chr19 2528476 2530197 ZBTB33 GTRD no Lung (A549) 108361232
chr19 2528476 2530197 ZBTB33 GTRD no Lung (A549) 108361233
chr19 2528530 2530224 ZNF143 GTRD no Epithelial (MCF-7) 21836234
chr19 2528530 2530224 ZNF143 GTRD no Epithelial (MCF-7) 108361243
chr19 2528530 2530224 ZNF143 GTRD no Epithelial (MCF-7) 108361244
chr19 2528574 2530257 TCF7L2 GTRD no Colon (HCT116) 21836246
chr19 2528574 2530257 TCF7L2 GTRD no Colon (HCT116) 108361259
chr19 2528574 2530257 TCF7L2 GTRD no Colon (HCT116) 108361260
chr19 2528617 2530424 TCF7L2 GTRD no Colon (HCT116) 21836256
chr19 2528617 2530424 TCF7L2 GTRD no Colon (HCT116) 108361271
chr19 2528617 2530424 TCF7L2 GTRD no Colon (HCT116) 108361272
chr19 2528643 2530457 TCF7L2 GTRD no Colon (HCT116) 21836260
chr19 2528643 2530457 TCF7L2 GTRD no Colon (HCT116) 108361277
chr19 2528643 2530457 TCF7L2 GTRD no Colon (HCT116) 108361278
chr19 2528682 2530210 ZNF143 GTRD no Epithelial (MCF-7) 21836273
chr19 2528682 2530210 ZNF143 GTRD no Epithelial (MCF-7) 108361293
chr19 2528682 2530210 ZNF143 GTRD no Epithelial (MCF-7) 108361294
chr19 2528762 2530157 ZBTB33 GTRD no Lung (A549) 21836282
chr19 2528762 2530157 ZBTB33 GTRD no Lung (A549) 108361304
chr19 2528762 2530157 ZBTB33 GTRD no Lung (A549) 108361305
chr19 2529209 2530203 ZNF274 GTRD no Bone Marrow (K562) 21836304
chr19 2529209 2530203 ZNF274 GTRD no Bone Marrow (K562) 108361331
chr19 2529224 2530225 ZBTB33 GTRD no Brain (SK-N-SH) 21836305
chr19 2529224 2530225 ZBTB33 GTRD no Brain (SK-N-SH) 108361332
chr19 2529232 2530230 TEF1 GTRD no Bone (Osteoblast) 21836307
chr19 2529232 2530230 TEF1 GTRD no Bone (Osteoblast) 108361334
chr19 2529313 2530159 ZBTB33 GTRD no Brain (SK-N-SH) 21836312
chr19 2529313 2530159 ZBTB33 GTRD no Brain (SK-N-SH) 108361339
chr19 2529324 2530206 ZNF274 GTRD no Liver (HepG2) 21836314
chr19 2529324 2530206 ZNF274 GTRD no Liver (HepG2) 108361341
chr19 2529334 2530140 ZNF274 GTRD no Blood (GM12878) 108361346
chr19 2529334 2530226 ZNF274 GTRD no Bone Marrow (K562) 21836317
chr19 2529334 2530226 ZNF274 GTRD no Bone Marrow (K562) 108361347
chr19 2529362 2530139 ZNF274 GTRD no Blood (GM12878) 108361352
chr19 2529366 2530249 ZNF274 GTRD no Blood (GM12878) 108361354
chr19 2529396 2530202 ZBTB33 GTRD no Lung (A549) 21836332
chr19 2529396 2530202 ZBTB33 GTRD no Lung (A549) 108361365
chr19 2529399 2530142 ZNF274 GTRD no Blood (GM12878) 108361368
chr19 2529401 2530185 ZBTB33 GTRD no Lung (A549) 21836338
chr19 2529401 2530185 ZBTB33 GTRD no Lung (A549) 108361372
chr19 2529404 2530234 ZBTB33 GTRD no Lung (A549) 21836342
chr19 2529404 2530234 ZBTB33 GTRD no Lung (A549) 108361377
chr19 2529404 2530260 ZNF143 GTRD no Epithelial (MCF-7) 21836343
chr19 2529404 2530260 ZNF143 GTRD no Epithelial (MCF-7) 108361378
chr19 2529408 2530147 ZNF274 GTRD no Cervix (HeLa-S3) 21836346
chr19 2529408 2530147 ZNF274 GTRD no Cervix (HeLa-S3) 108361381
chr19 2529415 2530157 ZNF274 GTRD no Cervix (HeLa-S3) 21836351
chr19 2529415 2530157 ZNF274 GTRD no Cervix (HeLa-S3) 108361388
chr19 2529415 2530159 ZNF274 GTRD no Cervix (HeLa-S3) 21836352
chr19 2529415 2530159 ZNF274 GTRD no Cervix (HeLa-S3) 108361389
chr19 2529415 2530254 ZNF274 GTRD no Bone Marrow (K562) 21836353
chr19 2529415 2530254 ZNF274 GTRD no Bone Marrow (K562) 108361390
chr19 2529426 2530259 ZNF274 GTRD no Cervix (HeLa-S3) 21836361
chr19 2529426 2530259 ZNF274 GTRD no Cervix (HeLa-S3) 108361399
chr19 2529431 2530139 ZNF274 GTRD no Cervix (HeLa-S3) 21836365
chr19 2529431 2530139 ZNF274 GTRD no Cervix (HeLa-S3) 108361403
chr19 2529448 2530151 ZNF274 GTRD no Bone Marrow (K562) 21836385
chr19 2529448 2530151 ZNF274 GTRD no Bone Marrow (K562) 108361425
chr19 2529448 2530222 ZBTB33 GTRD no Lung (A549) 21836386
chr19 2529448 2530222 ZBTB33 GTRD no Lung (A549) 108361426
chr19 2529454 2530160 ZNF274 GTRD no Blood (GM12878) 108361436
chr19 2529455 2530262 ZBTB33 GTRD no Brain (SK-N-SH) 21836399
chr19 2529455 2530262 ZBTB33 GTRD no Brain (SK-N-SH) 108361441
chr19 2529500 2530160 ZNF274 GTRD no Bone Marrow (K562) 21836429
chr19 2529500 2530160 ZNF274 GTRD no Bone Marrow (K562) 108361476
chr19 2529517 2530187 ZNF274 GTRD no Cervix (HeLa-S3) 21836439
chr19 2529517 2530187 ZNF274 GTRD no Cervix (HeLa-S3) 108361487
chr19 2529658 2530666 TCF7L2 GTRD no Colon (HCT116) 21836480
chr19 2529658 2530666 TCF7L2 GTRD no Colon (HCT116) 108361542
chr19 2530127 2530141 MTF1 JASPAR yes 112069976
Genes associated with rs6510680[chr19:2530139], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More