EnhancerDB
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  3. rs6511896[chr19:13966800]
Enhancers that have rs6511896[chr19:13966800]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6511896[chr19:13966800]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13965258 13967317 ZNF143 GTRD no Epithelial (MCF-7) 21852778
chr19 13965460 13967356 ZNF143 GTRD no Epithelial (MCF-7) 21852781
chr19 13966111 13966895 TCF7L2 GTRD no Colon (HCT116) 21852785
chr19 13966220 13966804 ZNF143 GTRD no Epithelial (MCF-7) 21852788
chr19 13966611 13967152 TCF7L2 GTRD no Colon (HCT116) 21852795
chr19 13966793 13966800 JUN TRANSFAC yes 112539228
chr19 13966793 13966800 SP1 TRANSFAC yes 112539229
chr19 13966798 13966804 LEF1 TRANSFAC yes 112539230
chr19 13966798 13966804 SOX10 JASPAR yes 112539231
Genes associated with rs6511896[chr19:13966800], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More