EnhancerDB
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  3. rs6538710[chr12:96813417]
Enhancers that have rs6538710[chr12:96813417]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96795782 96855361 enh14922
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs6538710[chr12:96813417]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96813408 96813417 SNAI2 JASPAR yes 123068310
chr12 96813408 96813418 FIGLA JASPAR yes 123068311
chr12 96813408 96813418 TCF4 JASPAR yes 123068312
chr12 96813410 96813419 ZEB1 JASPAR yes 123068313
chr12 96813412 96813417 SP1 TRANSFAC yes 123068314
chr12 96813414 96813419 TFAP2A TRANSFAC yes 123068315
chr12 96813414 96813420 MZF1 JASPAR yes 123068316
Genes associated with rs6538710[chr12:96813417], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More