EnhancerDB
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  3. rs6539455[chr12:109219903]
Enhancers that have rs6539455[chr12:109219903]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109212325 109229815 enh14978
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Blood (GM12878) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Lung (PC-9) Uterus Blood (T-cell) Heart
Transcript factors that have rs6539455[chr12:109219903]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109219896 109219904 FOXO3 JASPAR yes 123623622
chr12 109219903 109219918 HNF1A JASPAR yes 123623623
Genes associated with rs6539455[chr12:109219903], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 110152033 110208312 + FAM222A ENSG00000139438.5 110152033 932130 Spleen 0.0879783 12516