EnhancerDB
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Enhancers that have rs6540278[chr16:85620902]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr16 85620095 85621736 vista665
VISTA
Transcript factors that have rs6540278[chr16:85620902]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85606928 85621806 ZNF274 GTRD no Bone Marrow (K562) 21729676
chr16 85606928 85621806 ZNF274 GTRD no Bone Marrow (K562) 107686975
chr16 85606928 85621806 ZNF274 GTRD no Bone Marrow (K562) 108216607
chr16 85606928 85621806 ZNF274 GTRD no Bone Marrow (K562) 108216608
chr16 85619174 85621028 TCF7L2 GTRD no Colon (HCT116) 21730568
chr16 85619174 85621028 TCF7L2 GTRD no Colon (HCT116) 107686980
chr16 85619240 85620956 ZNF274 GTRD no Bone Marrow (K562) 21730570
chr16 85619240 85620956 ZNF274 GTRD no Bone Marrow (K562) 107686981
chr16 85619395 85620993 ZNF274 GTRD no Bone Marrow (K562) 21730574
chr16 85619395 85620993 ZNF274 GTRD no Bone Marrow (K562) 107686982
chr16 85619449 85621429 ZNF274 GTRD no Bone Marrow (K562) 21730576
chr16 85619449 85621429 ZNF274 GTRD no Bone Marrow (K562) 107686983
chr16 85619887 85621655 ZNF274 GTRD no Bone Marrow (K562) 21730581
chr16 85619887 85621655 ZNF274 GTRD no Bone Marrow (K562) 107686987
chr16 85620050 85622502 ZNF274 GTRD no Bone Marrow (K562) 21730583
chr16 85620050 85622502 ZNF274 GTRD no Bone Marrow (K562) 107686989
chr16 85620083 85620912 ZNF274 GTRD no Bone Marrow (K562) 21730584
chr16 85620083 85620912 ZNF274 GTRD no Bone Marrow (K562) 107686990
chr16 85620112 85620919 ZNF274 GTRD no Bone Marrow (K562) 21730585
chr16 85620112 85620919 ZNF274 GTRD no Bone Marrow (K562) 107686991
chr16 85620166 85620968 ZNF274 GTRD no Bone Marrow (K562) 21730587
chr16 85620166 85620968 ZNF274 GTRD no Bone Marrow (K562) 107686993
chr16 85620170 85620973 ZNF274 GTRD no Bone Marrow (K562) 21730588
chr16 85620170 85620973 ZNF274 GTRD no Bone Marrow (K562) 107686994
chr16 85620175 85621052 ZNF274 GTRD no Bone Marrow (K562) 21730589
chr16 85620175 85621052 ZNF274 GTRD no Bone Marrow (K562) 107686995
chr16 85620182 85621043 ZNF274 GTRD no Bone Marrow (K562) 21730590
chr16 85620182 85621043 ZNF274 GTRD no Bone Marrow (K562) 107686996
chr16 85620212 85620918 ZNF274 GTRD no Bone Marrow (K562) 21730591
chr16 85620212 85620918 ZNF274 GTRD no Bone Marrow (K562) 107686997
chr16 85620220 85620979 ZNF274 GTRD no Bone Marrow (K562) 21730592
chr16 85620220 85620979 ZNF274 GTRD no Bone Marrow (K562) 107686998
chr16 85620241 85620987 ZNF274 GTRD no Bone Marrow (K562) 21730594
chr16 85620241 85620987 ZNF274 GTRD no Bone Marrow (K562) 107687000
chr16 85620269 85620905 ZNF274 GTRD no Bone Marrow (K562) 21730595
chr16 85620269 85620905 ZNF274 GTRD no Bone Marrow (K562) 107687001
chr16 85620327 85620960 ZNF274 GTRD no Bone Marrow (K562) 21730600
chr16 85620327 85620960 ZNF274 GTRD no Bone Marrow (K562) 107687006
chr16 85620374 85621304 TCF7L2 GTRD no Colon (HCT116) 21730607
chr16 85620374 85621304 TCF7L2 GTRD no Colon (HCT116) 107687013
chr16 85620382 85623152 ZNF143 GTRD no Epithelial (MCF-7) 21730608
chr16 85620382 85623152 ZNF143 GTRD no Epithelial (MCF-7) 107687014
chr16 85620383 85621137 ZNF274 GTRD no Bone Marrow (K562) 21730609
chr16 85620383 85621137 ZNF274 GTRD no Bone Marrow (K562) 107687015
chr16 85620395 85621228 ZNF274 GTRD no Bone Marrow (K562) 21730611
chr16 85620395 85621228 ZNF274 GTRD no Bone Marrow (K562) 107687017
chr16 85620401 85620939 ZNF274 GTRD no Bone Marrow (K562) 21730612
chr16 85620401 85620939 ZNF274 GTRD no Bone Marrow (K562) 107687018
chr16 85620421 85621271 ZNF274 GTRD no Bone Marrow (K562) 21730614
chr16 85620421 85621271 ZNF274 GTRD no Bone Marrow (K562) 107687020
chr16 85620455 85621475 ZNF143 GTRD no Epithelial (MCF-7) 21730619
chr16 85620455 85621475 ZNF143 GTRD no Epithelial (MCF-7) 107687025
chr16 85620467 85620950 ZNF274 GTRD no Bone Marrow (K562) 21730620
chr16 85620467 85620950 ZNF274 GTRD no Bone Marrow (K562) 107687026
chr16 85620484 85621264 TCF7L2 GTRD no Colon (HCT116) 21730625
chr16 85620484 85621264 TCF7L2 GTRD no Colon (HCT116) 107687031
chr16 85620746 85621276 ZNF274 GTRD no Blood (GM12878) 107687033
chr16 85620887 85620906 CTCF JASPAR yes 12080457
chr16 85620887 85620906 CTCF JASPAR yes 111894615
chr16 85620896 85620902 YY1 JASPAR yes 12080458
chr16 85620896 85620902 YY1 JASPAR yes 111894616
Genes associated with rs6540278[chr16:85620902], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More