EnhancerDB
  1. Home
  2. SNP
  3. rs6540528[chr1:209595738]
Enhancers that have rs6540528[chr1:209595738]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209568193 209597635 enh12617
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Uterus Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs6540528[chr1:209595738]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209595707 209596266 TCF7L2 GTRD no Colon (HCT116) 21375410
chr1 209595735 209595756 ZNF263 JASPAR yes 34974564
Genes associated with rs6540528[chr1:209595738], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More