EnhancerDB
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Enhancers that have rs6541395[chr1:94247354]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 94213125 94252475 enh499
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs6541395[chr1:94247354]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 94245253 94247390 TCF7L2 GTRD no Colon (HCT116) 107815266
chr1 94247344 94247365 IRF1 JASPAR yes 30835933
chr1 94247346 94247361 PRDM1 JASPAR yes 30835934
chr1 94247346 94247361 STAT2 JASPAR yes 30835935
chr1 94247349 94247370 ZNF263 JASPAR yes 30835936
chr1 94247351 94247372 ZNF263 JASPAR yes 30835937
chr1 94247352 94247373 ZNF263 JASPAR yes 30835938
Genes associated with rs6541395[chr1:94247354], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More