EnhancerDB
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  3. rs6546727[chr2:26275282]
Enhancers that have rs6546727[chr2:26275282]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26273785 26313195 enh5372
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs6546727[chr2:26275282]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26275271 26275289 SRF JASPAR yes 72519094
chr2 26275275 26275283 FOXO3 JASPAR yes 72519095
chr2 26275278 26275294 SOX4 JASPAR yes 72519096
Genes associated with rs6546727[chr2:26275282], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More