EnhancerDB
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  3. rs6548016[chr2:30627574]
Enhancers that have rs6548016[chr2:30627574]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 30621325 30653955 enh33182
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs6548016[chr2:30627574]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 30627566 30627580 ZIC1 JASPAR yes 72765748
chr2 30627570 30627584 GLIS2 JASPAR yes 72765749
chr2 30627574 30627586 ZBTB7B JASPAR yes 72765750
chr2 30627574 30627586 ZBTB7C JASPAR yes 72765751
Genes associated with rs6548016[chr2:30627574], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More