EnhancerDB
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  3. rs6555980[chr5:171415363]
Enhancers that have rs6555980[chr5:171415363]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171406325 171422095 enh38666
Skin (Keratinocyte) Prostate (PC-3) Esophagus Astrocyte Blood (GM12878) Stomach Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs6555980[chr5:171415363]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171415343 171415363 RREB1 JASPAR yes 67755039
chr5 171415344 171415364 RREB1 JASPAR yes 67755041
chr5 171415348 171415363 FOXP1 JASPAR yes 67755042
chr5 171415350 171415365 FOXP1 JASPAR yes 67755043
Genes associated with rs6555980[chr5:171415363], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More