EnhancerDB
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  3. rs6580758[chr12:50913446]
Enhancers that have rs6580758[chr12:50913446]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr12 50913232 50913640 vista13378
VISTA
Transcript factors that have rs6580758[chr12:50913446]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50913113 50913642 P63 GTRD no Skin (Keratinocyte) 108031196
chr12 50913262 50913538 ZNF274 GTRD no Blood (GM12878) 21545029
chr12 50913262 50913538 ZNF274 GTRD no Blood (GM12878) 108031197
chr12 50913436 50913450 ONECUT1 JASPAR yes 82402179
chr12 50913436 50913450 ONECUT2 JASPAR yes 82402180
chr12 50913436 50913450 ONECUT3 JASPAR yes 82402181
chr12 50913436 50913450 ONECUT1 JASPAR yes 120837161
chr12 50913436 50913450 ONECUT2 JASPAR yes 120837162
chr12 50913436 50913450 ONECUT3 JASPAR yes 120837163
chr12 50913437 50913447 CUX2 JASPAR yes 82402182
chr12 50913437 50913447 CUX2 JASPAR yes 120837164
Genes associated with rs6580758[chr12:50913446], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More