EnhancerDB
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  3. rs6582660[chr12:46870401]
Enhancers that have rs6582660[chr12:46870401]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46859389 46872155 enh14677
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs6582660[chr12:46870401]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46870176 46870745 ZNF274 GTRD no Cervix (HeLa-S3) 21541917
chr12 46870244 46870685 ZBTB33 GTRD no Brain (SK-N-SH) 21541918
chr12 46870316 46870486 ZNF274 GTRD no Blood (GM12878) 21541919
chr12 46870340 46870659 ZNF143 GTRD no Epithelial (MCF-7) 21541920
chr12 46870397 46870408 CDX2 JASPAR yes 120626598
chr12 46870399 46870408 CDX1 JASPAR yes 120626599
Genes associated with rs6582660[chr12:46870401], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More