EnhancerDB
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  3. rs6603890[chr1:16521575]
Enhancers that have rs6603890[chr1:16521575]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6603890[chr1:16521575]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16521568 16521578 SREBF1 JASPAR yes 27034642
Genes associated with rs6603890[chr1:16521575], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 16713612 16763919 - SPATA21 ENSG00000187144.7 16763919 192037 Pancreas 0.270723 231