EnhancerDB
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  3. rs660509[chr1:229206593]
Enhancers that have rs660509[chr1:229206593]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229191845 229208275 enh12759
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Ovary Blood (T-cell) Esophagus Liver Lung (A549) Stomach Placenta Thyroid Uterus Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs660509[chr1:229206593]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229206582 229206603 IRF1 JASPAR yes 35957872
chr1 229206583 229206604 IRF1 JASPAR yes 35957873
chr1 229206584 229206596 FOXC2 JASPAR yes 35957874
chr1 229206585 229206600 FOXP1 JASPAR yes 35957875
chr1 229206587 229206602 FOXP1 JASPAR yes 35957876
chr1 229206588 229206603 FOXP1 JASPAR yes 35957877
chr1 229206589 229206604 FOXP1 JASPAR yes 35957878
chr1 229206590 229206605 FOXP1 JASPAR yes 35957879
chr1 229206591 229206606 FOXP1 JASPAR yes 35957880
chr1 229206592 229206607 FOXP1 JASPAR yes 35957881
chr1 229206593 229206608 FOXP1 JASPAR yes 35957882
Genes associated with rs660509[chr1:229206593], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More