EnhancerDB
  1. Home
  2. SNP
  3. rs66532198[chr19:11049860]
Enhancers that have rs66532198[chr19:11049860]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 11044165 11061272 enh17918
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs66532198[chr19:11049860]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 11048866 11049927 TCF7L2 GTRD no Colon (HCT116) 21849208
chr19 11049548 11050031 TCF7L2 GTRD no Colon (HCT116) 21849216
chr19 11049854 11049875 IRF1 JASPAR yes 112446480
chr19 11049856 11049871 PRDM1 JASPAR yes 112446481
chr19 11049856 11049871 STAT2 JASPAR yes 112446482
chr19 11049859 11049874 FOXP1 JASPAR yes 112446483
chr19 11049860 11049875 FOXP1 JASPAR yes 112446484
Genes associated with rs66532198[chr19:11049860], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More