EnhancerDB
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  3. rs6656002[chr1:230361428]
Enhancers that have rs6656002[chr1:230361428]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230338765 230362772 enh27598
Bone Marrow (K562) Liver Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs6656002[chr1:230361428]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230361417 230361438 IRF1 JASPAR yes 36036451
chr1 230361422 230361443 IRF1 JASPAR yes 36036452
chr1 230361423 230361429 TCF4 TRANSFAC yes 36036453
chr1 230361423 230361438 FOXP1 JASPAR yes 36036454
chr1 230361424 230361435 FOXP2 JASPAR yes 36036455
chr1 230361424 230361436 FOXC2 JASPAR yes 36036456
chr1 230361424 230361439 STAT2 JASPAR yes 36036457
chr1 230361425 230361440 FOXP1 JASPAR yes 36036458
chr1 230361427 230361442 FOXP1 JASPAR yes 36036459
chr1 230361428 230361443 FOXP1 JASPAR yes 36036460
Genes associated with rs6656002[chr1:230361428], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More