EnhancerDB
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  3. rs66562074[chr12:50938407]
Enhancers that have rs66562074[chr12:50938407]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs66562074[chr12:50938407]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50938391 50938412 IRF1 JASPAR yes 120841451
chr12 50938393 50938408 PRDM1 JASPAR yes 120841453
chr12 50938393 50938408 STAT2 JASPAR yes 120841454
chr12 50938394 50938408 SPIC JASPAR yes 120841455
chr12 50938394 50938408 STAT1 JASPAR yes 120841456
chr12 50938395 50938409 IRF7 JASPAR yes 120841457
chr12 50938395 50938409 IRF8 JASPAR yes 120841458
chr12 50938395 50938410 IRF9 JASPAR yes 120841459
chr12 50938395 50938416 IRF1 JASPAR yes 120841460
chr12 50938396 50938411 FOXP1 JASPAR yes 120841461
chr12 50938396 50938417 IRF1 JASPAR yes 120841462
chr12 50938397 50938412 PRDM1 JASPAR yes 120841463
chr12 50938397 50938418 IRF1 JASPAR yes 120841464
chr12 50938401 50938422 IRF1 JASPAR yes 120841465
chr12 50938402 50938417 FOXP1 JASPAR yes 120841466
chr12 50938402 50938423 IRF1 JASPAR yes 120841467
chr12 50938403 50938424 IRF1 JASPAR yes 120841468
chr12 50938404 50938419 FOXP1 JASPAR yes 120841469
chr12 50938404 50938425 IRF1 JASPAR yes 120841470
chr12 50938406 50938421 FOXP1 JASPAR yes 120841471
chr12 50938407 50938422 FOXP1 JASPAR yes 120841472
Genes associated with rs66562074[chr12:50938407], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More