EnhancerDB
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  3. rs6657338[chr1:230351573]
Enhancers that have rs6657338[chr1:230351573]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230338765 230362772 enh27598
Bone Marrow (K562) Liver Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs6657338[chr1:230351573]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230351570 230351574 YY1 TRANSFAC yes 36035059
chr1 230351571 230351581 EMX1 JASPAR yes 36035060
chr1 230351571 230351581 GSX2 JASPAR yes 36035061
chr1 230351571 230351581 HOXB2 JASPAR yes 36035062
chr1 230351571 230351581 MEOX2 JASPAR yes 36035063
chr1 230351571 230351581 MNX1 JASPAR yes 36035064
chr1 230351572 230351580 LMX1A JASPAR yes 36035065
chr1 230351572 230351580 LMX1B JASPAR yes 36035066
chr1 230351572 230351580 NKX6-1 JASPAR yes 36035067
chr1 230351572 230351580 NKX6-2 JASPAR yes 36035068
chr1 230351572 230351580 PDX1 JASPAR yes 36035069
chr1 230351572 230351580 VAX1 JASPAR yes 36035070
chr1 230351572 230351580 VAX2 JASPAR yes 36035071
chr1 230351572 230351580 VSX1 JASPAR yes 36035072
Genes associated with rs6657338[chr1:230351573], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More