EnhancerDB
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  3. rs6661705[chr1:239984856]
Enhancers that have rs6661705[chr1:239984856]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 239967733 239985595 enh12821
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs6661705[chr1:239984856]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 239984842 239984860 ESR1 JASPAR yes 36540232
chr1 239984851 239984866 TFAP2C JASPAR yes 36540233
chr1 239984852 239984857 SP1 TRANSFAC yes 36540234
chr1 239984854 239984865 EBF1 JASPAR yes 36540235
chr1 239984854 239984867 TFAP2A JASPAR yes 36540236
chr1 239984854 239984867 TFAP2B JASPAR yes 36540237
chr1 239984854 239984867 TFAP2C JASPAR yes 36540238
chr1 239984855 239984864 TFAP2A JASPAR yes 36540239
chr1 239984856 239984867 EBF1 JASPAR yes 36540240
Genes associated with rs6661705[chr1:239984856], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More