EnhancerDB
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  3. rs6661886[chr1:16521228]
Enhancers that have rs6661886[chr1:16521228]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6661886[chr1:16521228]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16521207 16521228 ZNF263 JASPAR yes 27034514
chr1 16521210 16521231 ZNF263 JASPAR yes 27034515
chr1 16521211 16521232 ZNF263 JASPAR yes 27034516
chr1 16521214 16521235 ZNF263 JASPAR yes 27034517
chr1 16521215 16521236 ZNF263 JASPAR yes 27034518
chr1 16521217 16521238 IRF1 JASPAR yes 27034519
chr1 16521219 16521240 ZNF263 JASPAR yes 27034520
chr1 16521220 16521241 ZNF263 JASPAR yes 27034521
chr1 16521221 16521236 STAT2 JASPAR yes 27034523
chr1 16521221 16521242 IRF1 JASPAR yes 27034524
chr1 16521222 16521243 ZNF263 JASPAR yes 27034525
chr1 16521223 16521244 IRF1 JASPAR yes 27034526
chr1 16521223 16521244 ZNF263 JASPAR yes 27034527
chr1 16521224 16521238 IRF7 JASPAR yes 27034528
chr1 16521224 16521238 IRF8 JASPAR yes 27034529
chr1 16521225 16521239 STAT1 JASPAR yes 27034530
chr1 16521225 16521240 PRDM1 JASPAR yes 27034531
chr1 16521225 16521240 STAT2 JASPAR yes 27034532
chr1 16521226 16521247 ZNF263 JASPAR yes 27034533
chr1 16521227 16521248 IRF1 JASPAR yes 27034534
Genes associated with rs6661886[chr1:16521228], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More