EnhancerDB
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  3. rs6663850[chr1:170529243]
Enhancers that have rs6663850[chr1:170529243]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 170524205 170534569 enh12364
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Stomach Muscle (A673) Placenta Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs6663850[chr1:170529243]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 170528595 170529416 P63 GTRD no Skin (Keratinocyte) 21349538
chr1 170528602 170529424 P63 GTRD no Skin (Keratinocyte) 21349539
chr1 170528638 170529433 P63 GTRD no Skin (Keratinocyte) 21349540
chr1 170528642 170529372 P63 GTRD no Skin (Keratinocyte) 21349541
chr1 170529227 170529248 IRF1 JASPAR yes 33040248
chr1 170529230 170529244 SPI1 JASPAR yes 33040249
chr1 170529230 170529244 SPIC JASPAR yes 33040250
chr1 170529243 170529253 NFIA JASPAR yes 33040251
Genes associated with rs6663850[chr1:170529243], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More