EnhancerDB
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  3. rs6665564[chr1:41419682]
Enhancers that have rs6665564[chr1:41419682]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41400705 41424275 enh11780
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Liver Bone (Osteoblast) Placenta Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Uterus Stomach
Transcript factors that have rs6665564[chr1:41419682]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41419676 41419690 ONECUT1 JASPAR yes 28359351
chr1 41419676 41419690 ONECUT2 JASPAR yes 28359352
chr1 41419676 41419690 ONECUT3 JASPAR yes 28359353
chr1 41419679 41419689 CUX1 JASPAR yes 28359354
chr1 41419679 41419689 CUX2 JASPAR yes 28359355
chr1 41419679 41419689 PAX3 JASPAR yes 28359356
chr1 41419679 41419689 PAX7 JASPAR yes 28359357
chr1 41419680 41419696 SOX4 JASPAR yes 28359358
chr1 41419681 41419696 SOX21 JASPAR yes 28359359
Genes associated with rs6665564[chr1:41419682], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More