EnhancerDB
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  3. rs6665924[chr1:12619696]
Enhancers that have rs6665924[chr1:12619696]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12597605 12619763 enh11515
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs6665924[chr1:12619696]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12612973 12621161 ZNF274 GTRD no Bone Marrow (K562) 107802127
chr1 12612973 12621161 ZNF274 GTRD no Bone Marrow (K562) 107802128
chr1 12619681 12619699 RARA JASPAR yes 26834055
chr1 12619688 12619701 NR2F1 JASPAR yes 26834056
chr1 12619692 12619700 CREB1 JASPAR yes 26834057
chr1 12619696 12619706 SREBF2 JASPAR yes 26834058
chr1 12619696 12619707 USF1 JASPAR yes 26834059
chr1 12619696 12619707 USF2 JASPAR yes 26834060
Genes associated with rs6665924[chr1:12619696], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More