EnhancerDB
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  3. rs6668302[chr1:209590948]
Enhancers that have rs6668302[chr1:209590948]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209568193 209597635 enh12617
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Uterus Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs6668302[chr1:209590948]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209590059 209591032 ZBTB33 GTRD no Lung (A549) 21375373
chr1 209590059 209591032 ZBTB33 GTRD no Lung (A549) 107865768
chr1 209590088 209591055 AR GTRD no Prostate (PC-3) 21375374
chr1 209590088 209591055 AR GTRD no Prostate (PC-3) 107865769
chr1 209590145 209591011 ZNF143 GTRD no Epithelial (MCF-7) 21375375
chr1 209590145 209591011 ZNF143 GTRD no Epithelial (MCF-7) 107865770
chr1 209590175 209591049 ZNF274 GTRD no Bone Marrow (K562) 107865771
chr1 209590192 209591140 ZNF143 GTRD no Epithelial (MCF-7) 21375376
chr1 209590192 209591140 ZNF143 GTRD no Epithelial (MCF-7) 107865772
chr1 209590197 209591077 ZBTB33 GTRD no Lung (A549) 21375378
chr1 209590197 209591077 ZBTB33 GTRD no Lung (A549) 107865774
chr1 209590277 209590994 ZNF274 GTRD no Liver (HepG2) 107865777
chr1 209590937 209590950 NR2F1 JASPAR yes 34973995
Genes associated with rs6668302[chr1:209590948], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More