EnhancerDB
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  3. rs6670020[chr1:201510398]
Enhancers that have rs6670020[chr1:201510398]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201492445 201517481 enh12522
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs6670020[chr1:201510398]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201504593 201515974 ZNF143 GTRD no Epithelial (MCF-7) 107856607
chr1 201504593 201515974 ZNF143 GTRD no Epithelial (MCF-7) 107856608
chr1 201510144 201510520 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21364575
chr1 201510394 201510408 E2F7 JASPAR yes 34504349
chr1 201510395 201510407 E2F8 JASPAR yes 34504350
chr1 201510397 201510402 TFAP2A TRANSFAC yes 34504351
chr1 201510397 201510403 MZF1 JASPAR yes 34504352
Genes associated with rs6670020[chr1:201510398], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More