EnhancerDB
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  3. rs6672866[chr1:202085100]
Enhancers that have rs6672866[chr1:202085100]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202068088 202086155 enh12535
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs6672866[chr1:202085100]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202083998 202089278 ZNF143 GTRD no Epithelial (MCF-7) 21367429
chr1 202084055 202089460 ZNF143 GTRD no Epithelial (MCF-7) 21367430
chr1 202084257 202087502 ZNF274 GTRD no Cervix (HeLa-S3) 21367431
chr1 202084262 202087673 ZNF143 GTRD no Epithelial (MCF-7) 21367432
chr1 202084276 202088728 ZNF143 GTRD no Epithelial (MCF-7) 21367433
chr1 202084306 202088770 ZNF143 GTRD no Epithelial (MCF-7) 21367434
chr1 202084340 202088662 ZNF143 GTRD no Epithelial (MCF-7) 21367435
chr1 202084360 202088143 ZNF143 GTRD no Epithelial (MCF-7) 21367436
chr1 202084395 202087705 ZNF143 GTRD no Epithelial (MCF-7) 21367437
chr1 202084405 202088910 ZNF143 GTRD no Epithelial (MCF-7) 21367438
chr1 202084472 202088872 ZNF143 GTRD no Epithelial (MCF-7) 21367439
chr1 202084480 202087803 ZNF143 GTRD no Epithelial (MCF-7) 21367440
chr1 202084495 202085357 ZNF143 GTRD no Epithelial (MCF-7) 21367441
chr1 202084496 202088834 ZNF143 GTRD no Epithelial (MCF-7) 21367442
chr1 202084500 202088047 ZNF143 GTRD no Epithelial (MCF-7) 21367443
chr1 202084505 202087620 ZNF274 GTRD no Cervix (HeLa-S3) 21367444
chr1 202084507 202087857 ZNF143 GTRD no Epithelial (MCF-7) 21367445
chr1 202084513 202087825 ZNF143 GTRD no Epithelial (MCF-7) 21367446
chr1 202084515 202086608 ZNF143 GTRD no Epithelial (MCF-7) 21367447
chr1 202084528 202087621 ZNF143 GTRD no Epithelial (MCF-7) 21367448
chr1 202084528 202087830 ZNF143 GTRD no Epithelial (MCF-7) 21367449
chr1 202084539 202086581 ZNF143 GTRD no Epithelial (MCF-7) 21367450
chr1 202084545 202088820 ZNF143 GTRD no Epithelial (MCF-7) 21367451
chr1 202084546 202086585 ZNF143 GTRD no Epithelial (MCF-7) 21367452
chr1 202084551 202085372 TCF7L2 GTRD no Colon (HCT116) 21367453
chr1 202084583 202085434 ZNF274 GTRD no Bone Marrow (K562) 21367454
chr1 202084610 202086539 ZNF143 GTRD no Epithelial (MCF-7) 21367455
chr1 202084612 202086322 TCF7L2 GTRD no Colon (HCT116) 21367456
chr1 202084614 202087682 ZNF143 GTRD no Epithelial (MCF-7) 21367457
chr1 202084619 202087653 ZNF143 GTRD no Epithelial (MCF-7) 21367458
chr1 202084625 202086556 ZNF143 GTRD no Epithelial (MCF-7) 21367459
chr1 202084640 202086361 ZNF143 GTRD no Epithelial (MCF-7) 21367461
chr1 202084642 202086405 ZNF143 GTRD no Epithelial (MCF-7) 21367462
chr1 202084650 202086397 ZNF274 GTRD no Cervix (HeLa-S3) 21367463
chr1 202084656 202085514 TCF7L2 GTRD no Colon (HCT116) 21367464
chr1 202084657 202086364 TCF7L2 GTRD no Colon (HCT116) 21367465
chr1 202084659 202087702 ZNF143 GTRD no Epithelial (MCF-7) 21367466
chr1 202084674 202086362 ZNF143 GTRD no Epithelial (MCF-7) 21367467
chr1 202084681 202086608 ZNF274 GTRD no Cervix (HeLa-S3) 21367468
chr1 202084685 202085455 ZNF143 GTRD no Epithelial (MCF-7) 21367469
chr1 202084689 202086436 ZNF143 GTRD no Epithelial (MCF-7) 21367470
chr1 202084693 202085340 TCF7L2 GTRD no Colon (HCT116) 21367471
chr1 202084721 202086322 ZNF143 GTRD no Epithelial (MCF-7) 21367472
chr1 202084723 202085839 TCF7L2 GTRD no Colon (HCT116) 21367473
chr1 202084727 202085179 ZNF274 GTRD no Bone Marrow (K562) 21367474
chr1 202084731 202086253 TCF7L2 GTRD no Colon (HCT116) 21367475
chr1 202084759 202085781 TCF7L2 GTRD no Colon (HCT116) 21367476
chr1 202084773 202085701 TCF7L2 GTRD no Colon (HCT116) 21367477
chr1 202084775 202085372 TCF7L2 GTRD no Colon (HCT116) 21367478
chr1 202084790 202086327 ZNF274 GTRD no Bone Marrow (K562) 21367479
chr1 202084794 202085659 ZNF143 GTRD no Epithelial (MCF-7) 21367480
chr1 202084808 202086327 ZNF274 GTRD no Bone Marrow (K562) 21367481
chr1 202084813 202085483 ZNF143 GTRD no Epithelial (MCF-7) 21367482
chr1 202084857 202086310 TCF7L2 GTRD no Colon (HCT116) 21367483
chr1 202084865 202086195 TCF7L2 GTRD no Colon (HCT116) 21367484
chr1 202085021 202085805 TCF7L2 GTRD no Colon (HCT116) 21367485
chr1 202085099 202085109 SP1 JASPAR yes 34555676
Genes associated with rs6672866[chr1:202085100], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More