EnhancerDB
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  3. rs6676607[chr1:224386826]
Enhancers that have rs6676607[chr1:224386826]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224381693 224395855 enh12716
Bone Marrow (K562) Astrocyte Colon (HCT116) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs6676607[chr1:224386826]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224386821 224386831 SREBF2 JASPAR yes 35692809
chr1 224386821 224386831 TBX21 JASPAR yes 35692810
chr1 224386821 224386832 TBX20 JASPAR yes 35692811
chr1 224386821 224386832 TBX2 JASPAR yes 35692812
chr1 224386821 224386834 EOMES JASPAR yes 35692813
chr1 224386822 224386830 MGA JASPAR yes 35692814
chr1 224386822 224386832 TBR1 JASPAR yes 35692815
Genes associated with rs6676607[chr1:224386826], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More