EnhancerDB
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  3. rs6678417[chr1:203493363]
Enhancers that have rs6678417[chr1:203493363]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203471885 203497995 enh12556
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs6678417[chr1:203493363]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203493355 203493369 ONECUT1 JASPAR yes 34635361
chr1 203493355 203493369 ONECUT2 JASPAR yes 34635362
chr1 203493355 203493369 ONECUT3 JASPAR yes 34635363
chr1 203493358 203493368 CUX1 JASPAR yes 34635364
chr1 203493358 203493368 CUX2 JASPAR yes 34635365
chr1 203493360 203493371 DMRT3 JASPAR yes 34635366
Genes associated with rs6678417[chr1:203493363], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 203059782 203136533 + ADORA1 ENSG00000163485.11 203059782 356830 Stomach 0.337295 1733