EnhancerDB
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  3. rs6680258[chr1:40399488]
Enhancers that have rs6680258[chr1:40399488]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40395645 40411775 enh11770
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung Placenta Breast Lung (PC-9) Pancreas Muscle (Myotube) Uterus Stomach
Transcript factors that have rs6680258[chr1:40399488]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40398439 40405814 ZNF274 GTRD no Blood (GM12878) 107802908
chr1 40399487 40399497 SP1 TRANSFAC yes 28300912
chr1 40399487 40399508 ZNF263 JASPAR yes 28300913
chr1 40399488 40399498 SP1 JASPAR yes 28300914
Genes associated with rs6680258[chr1:40399488], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More