EnhancerDB
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  3. rs6680755[chr1:94245782]
Enhancers that have rs6680755[chr1:94245782]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 94213125 94252475 enh499
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs6680755[chr1:94245782]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 94244537 94246014 POLR2A UCSC Txn Factor no Conserved 107815214
chr1 94245198 94245907 TCF7L2 UCSC Txn Factor no Conserved 107815252
chr1 94245212 94245862 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107815255
chr1 94245215 94245791 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107815257
chr1 94245222 94245799 TFAP2C UCSC Txn Factor no Conserved 107815261
chr1 94245222 94245799 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107815262
chr1 94245253 94247390 TCF7L2 GTRD no Colon (HCT116) 107815266
chr1 94245286 94245890 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107815271
Genes associated with rs6680755[chr1:94245782], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More