EnhancerDB
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  3. rs66827493[chr17:78745215]
Enhancers that have rs66827493[chr17:78745215]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs66827493[chr17:78745215]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78744201 78746331 ZNF274 GTRD no Blood (GM12878) 21797242
chr17 78744201 78746331 ZNF274 GTRD no Blood (GM12878) 108307389
chr17 78744304 78746408 ZBTB33 GTRD no Lung (A549) 108307390
chr17 78744461 78745792 ZNF274 GTRD no Blood (GM12878) 21797243
chr17 78744461 78745792 ZNF274 GTRD no Blood (GM12878) 108307391
chr17 78744652 78746369 ZNF274 GTRD no Blood (GM12878) 21797244
chr17 78744652 78746369 ZNF274 GTRD no Blood (GM12878) 108307393
chr17 78744758 78750409 ZNF274 GTRD no Liver (HepG2) 108307394
chr17 78744758 78750409 ZNF274 GTRD no Liver (HepG2) 108307395
chr17 78744758 78750409 ZNF274 GTRD no Liver (HepG2) 108307396
chr17 78744761 78746462 ZBTB33 GTRD no Lung (A549) 108307397
chr17 78744818 78745848 ZNF274 GTRD no Blood (GM12878) 21797245
chr17 78744818 78745848 ZNF274 GTRD no Blood (GM12878) 108307398
chr17 78744830 78745709 ZNF274 GTRD no Blood (GM12878) 21797246
chr17 78744830 78745709 ZNF274 GTRD no Blood (GM12878) 108307399
chr17 78744868 78745703 ZNF274 GTRD no Blood (GM12878) 21797247
chr17 78744868 78745703 ZNF274 GTRD no Blood (GM12878) 108307400
chr17 78745125 78749337 ZNF274 GTRD no Liver (HepG2) 108307401
chr17 78745125 78749337 ZNF274 GTRD no Liver (HepG2) 108307402
chr17 78745204 78745215 NFKB1 JASPAR yes 56277179
chr17 78745208 78745219 E2F4 JASPAR yes 56277181
chr17 78745211 78745230 CTCF JASPAR yes 56277182
Genes associated with rs66827493[chr17:78745215], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More