EnhancerDB
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  3. rs6683597[chr1:53881254]
Enhancers that have rs6683597[chr1:53881254]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 53871953 53884901 enh26703
Prostate (PC-3) Brain (SK-N-MC) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs6683597[chr1:53881254]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 53881242 53881257 FOXP1 JASPAR yes 28930343
chr1 53881243 53881254 FOXA1 JASPAR yes 28930344
chr1 53881243 53881258 FOXA1 JASPAR yes 28930345
chr1 53881244 53881255 FOXB1 JASPAR yes 28930347
chr1 53881244 53881255 FOXC1 JASPAR yes 28930348
chr1 53881244 53881256 FOXC2 JASPAR yes 28930349
chr1 53881245 53881256 FOXP2 JASPAR yes 28930350
chr1 53881247 53881254 FOXD2 JASPAR yes 28930351
chr1 53881247 53881254 FOXI1 JASPAR yes 28930352
chr1 53881247 53881254 FOXL1 JASPAR yes 28930353
chr1 53881247 53881254 FOXO4 JASPAR yes 28930354
chr1 53881247 53881254 FOXO6 JASPAR yes 28930355
chr1 53881247 53881254 FOXP3 JASPAR yes 28930356
chr1 53881247 53881255 FOXD1 JASPAR yes 28930357
chr1 53881247 53881255 FOXO3 JASPAR yes 28930358
chr1 53881251 53881265 GATA2 JASPAR yes 28930359
chr1 53881253 53881261 GATA5 JASPAR yes 28930360
Genes associated with rs6683597[chr1:53881254], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More