EnhancerDB
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  3. rs6687253[chr1:181114224]
Enhancers that have rs6687253[chr1:181114224]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 181093745 181114755 enh791
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6687253[chr1:181114224]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 181111332 181114427 ZNF143 GTRD no Epithelial (MCF-7) 21356196
chr1 181114215 181114225 GSC2 JASPAR yes 33558712
chr1 181114215 181114225 GSC JASPAR yes 33558713
chr1 181114216 181114224 OTX1 JASPAR yes 33558714
chr1 181114216 181114225 PITX3 JASPAR yes 33558715
Genes associated with rs6687253[chr1:181114224], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More