EnhancerDB
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Enhancers that have rs6688819[chr1:225960250]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225938095 225960315 enh12725
Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6688819[chr1:225960250]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225959924 225960380 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21385892
chr1 225959951 225960415 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21385894
chr1 225959955 225960331 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385895
chr1 225959979 225960359 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385898
chr1 225959985 225960345 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21385899
chr1 225959993 225960337 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21385900
chr1 225959996 225960316 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21385901
chr1 225960003 225960399 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21385902
chr1 225960013 225960277 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21385903
chr1 225960016 225960492 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21385904
chr1 225960027 225960357 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21385905
chr1 225960036 225960312 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385906
chr1 225960040 225960292 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21385907
chr1 225960052 225960291 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385908
chr1 225960053 225960363 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21385909
chr1 225960067 225960272 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21385910
chr1 225960079 225960309 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385911
chr1 225960095 225960288 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21385912
chr1 225960117 225960279 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21385913
chr1 225960136 225960263 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21385914
chr1 225960247 225960252 ETS2 TRANSFAC yes 35770502
chr1 225960249 225960260 E2F6 JASPAR yes 35770503
Genes associated with rs6688819[chr1:225960250], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More